To add to this, the pages that are generated by S2 instead of BML are found in cgi-bin/LJ/S2/ . There you'll find RecentPage.pm (username.dreamwidth.org/), FriendsPage.pm (username.dreamwidth.org/read), EntryPage.pm (username.dreamwidth.org/####.html), etc. Those files pass information to the actual S2 code so that it can be used to render the pages.
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